Undergraduate
Faculty of Science and Letters
Molecular Biology And Genetics
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Secondary Metabolism

Course CodeSemester Course Name LE/RC/LA Course Type Language of Instruction ECTS
MBG5014 Secondary Metabolism 2/0/0 DE Turkish 4
Course Goals
 In industrial scale seconder metabolyte production, strategies, metabolic pathways, regulations, plant and microbial-based seconder metabolyte productions and applications and biotechnological processes 


Prerequisite(s) -
Corequisite(s) -
Special Requisite(s) -
Instructor(s) Professor Seyhan Altun
Course Assistant(s)
Schedule Friday 10.00-12.00 100% distance learning via CATS platform
Office Hour(s) Ataköy Campus Online meetings via CATS platform
Teaching Methods and Techniques  Oral and ppt presentations
Principle Sources  1.       Plant secondary metabolites: Dynamical regulation in response to environmental factors, 2017 by Tiago Olivoto, Maicon Nardino and Velci Queiróz de Souza


2.       Transgenesis and Secondary Metabolism (Reference Series in Phytochemistry),  2017 by Sumita Jha

3.       Extremophilic Cyanobacteria For Novel Drug Development (SpringerBriefs in Pharmaceutical Science & Drug Development) 2014 by Sikha Mandal and Jnanendra Rath

4.       Functions and Biotechnology of Plant Secondary Metabolites, Second Edition, Blackwell Publishing Ltd, 2010 by M. Wink

5.       Biotechnology: Products of Secondary Metabolism, Volume 7, Second Edition, Wiley Company, 2008 by H.J. Rehm, G. Reed

Other Sources
Course Schedules
Week Contents Learning Methods
1. Week Introduction to secondary metabolism, the importance of seconder metabolytes as pharmaceuticals, the regulations of seconder metabolyte production Oral and ppt presentation
2. Week Antibacterial, antifungal and antiviral effects of seconder metabolytes Oral and ppt presentation
3. Week Plant-based seconder metabolytes, new medicinal applications of plant-based secondary metabolytes Oral and ppt presentation
4. Week Plant based seconder metabolytes, the importance of plant cell cultures Oral and ppt presentation
5. Week Biosynthesis of seconder metabolytes Oral and ppt presentation
6. Week Antibiotics, regulation of bacterial antibiotic production, β-Laktam, peptide, glicopeptide and policetide antibiotics Oral and ppt presentation
7. Week Midterm exam Exam
8. Week Phenols, polyphenols and tanins Oral and ppt presentation
9. Week Sulphur based components, terpens, alcaloids, acetylens, falvanoids Oral and ppt presentation
10. Week Antitumoral agents, classic anticancer pharmaceuticals Oral and ppt presentation
11. Week Production of seconder metabolytes, technological approaches Oral and ppt presentation
12. Week Production of seconder metabolytes, technological approaches Oral and ppt presentation
13. Week Recent literature search about the issue Oral and ppt presentation
14. Week Recent literature search about the issue/ Project presentations Oral and ppt presentation
15. Week Project presentations Oral and ppt presentation
16. Week Final exam Exam
17. Week Final exam Exam
Assessments
Evaluation tools Quantity Weight(%)
Midterm(s) 1 10
Homework / Term Projects / Presentations 1 20
Project(s) 1 20
Attendance 1 10
Final Exam 1 40


Program Outcomes
PO-1To apply all knowledge about basic sciences such as mathematics, physics, chemistry and biology to all problems in molecular biology and genetics
PO-2To be able to identify, model and produce solutions against to problems related to molecular biology and genetics
PO-3To start a procedure, proceed and finalize about determined problem by using analytical techniques
PO-4To be able to understand all knowledge about living organisms which is main subject of molecular biology and genetics
PO-5To contribute scientific research and development and add further information
PO-6To be able to analyze data, design an experiment and proceed and annoate the results
PO-7To be able to use current techniques and analysis methods in molecular biology and genetics
PO-8To be able to be a part of a team in disciplinary or multidisciplinary, national or international public problems focused projects and use at least one foreign language for vocational purposes
PO-9To be able to behave individually, take initiative and creativity skills
PO-10To communicate briefly and clear using oral or written presentation skills to present individual working performance and independent decisions
PO-11To carry responsibility to vocational and ethical issues
PO-12To be aware about quality assessment
PO-13To adopt in principle the importance of life-learning subject and graduate self-development by following new literature about field and apply current knowledge
Learning Outcomes
LO-1To have knowledge about plant-based seconder metabolytes
LO-2To have knowledge about the types of microorganisms based bioactive seconder metabolytes
LO-3To understand the importance of seconder metabolytes in pharmaceutical industry
LO-4To learn the metabolic pathways related with seconder metabolytes and their regulatory mechanisms
LO-5To have the knowledge about the technological applications in seconder metabolyte productions
Course Assessment Matrix:
Program Outcomes - Learning Outcomes Matrix
 PO 1PO 2PO 3PO 4PO 5PO 6PO 7PO 8PO 9PO 10PO 11PO 12PO 13