The definition of molecular markers, types of the molecular markers, the importance of molecular markers in plant breeding, investigation on technical applications (Nukleic acid isolation, polymerase chain reaction, PAGE, capillary electrophoresis, sequencing), principle and applications of PCR-based molecular markers, AFLP (amplified fragment length polymorphism), SSR(simple sequence repeats,microsatellites) prensibi ve metot uygulamaları, SNP, SSR detection methods and SNP detection methods
Prerequisite(s)
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Corequisite(s)
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Special Requisite(s)
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Instructor(s)
Professor Çimen Atak
Course Assistant(s)
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Schedule
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Office Hour(s)
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Teaching Methods and Techniques
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Principle Sources
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Other Sources
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Course Schedules
Week
Contents
Learning Methods
1. Week
Definition and the types of molecular markers
Oral presentation
2. Week
The importance of molecular markers in plant breeding studies
Oral presentation
3. Week
Technical approaches in applications
Oral presentation
4. Week
Nucleic acid isolation, Polymerase chain reaction
Oral presentation
5. Week
PAGE, Capillary electrophoresis
Oral presentation
6. Week
Sequencing
Oral presentation
7. Week
Midterm Exam
Exam
8. Week
PCR-based molecular marker methods
Oral presentation
9. Week
AFLP (Amplified Fragment Length Polymorphism) principle and applications
Oral presentation
10. Week
AFLP (Amplified Fragment Length Polymorphism) principle and applications
Oral presentation
11. Week
SSR(Simple Sequence Repeats, Microsatellites) principle and applications
Oral presentation
12. Week
SSR(Simple Sequence Repeats, Microsatellites) principle and applications
Oral presentation
13. Week
SNP (Single Nucleotid Polymorphism) principle and applications
Oral presentation
14. Week
SSR determination methods
Oral presentation
15. Week
Final Exam
Exam
16. Week
Final Exam
Exam
17. Week
Final Exam
Exam
Assessments
Evaluation tools
Quantity
Weight(%)
Midterm(s)
1
20
Project(s)
1
20
Final Exam
1
60
Program Outcomes
PO-1
To be able to improve the current and advanced level knowledge coming from undergraduate and graduate degree qualifications with originial ideas and/or researches into professional field end to reach the genuine definitions introcuding novelty of science
PO-2
To realise the network of the related field with other interdisciplinary fields, to reach the novel results coming from the analysis, sythesis and evaluation of new and complex ideas
PO-3
To be able to think systematically about the novel ideas in related field
PO-4
To be able to develop a novel scientific technique or to introduce the known technique into a different field
PO-5
To be able to raise qualified individuals that obtain and evaluate the effective scientific results
PO-6
To be able to discuss the scientific results in related field and present them by effective interactive relation strategies
PO-7
To be able to decide strategically to solve the scientific problem and produce the solution
PO-8
To be able to produce solutions to social, scientific and ethical subjects in related field or in industry
PO-9
To be able to discuss field related subjects and to gain ability in effective verbal and visual communication by using at least one foreign language ("European Language Portfolio Global Scale", Level C1).
PO-10
To be able to being a mentor in the novel and interdisciplinary areas that requires the solutions of problems
PO-11
To gain advanced research ability in related field
PO-12
To be able to resarch, design, realise and perform a novel subject
Learning Outcomes
LO-1
To have information about molecular markers
LO-2
To have knowledge about usage of molecular markers in plant breeding programs
LO-3
To have knowledge about technical applications in molecular marker analysis
LO-4
To have information about the principle and the applications of AFLP method
LO-5
To have information about the principle and the applications of SSR method
LO-6
To have information about the principle and the applications of SNP method